STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APW66841.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)    
Predicted Functional Partners:
APW66842.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.857
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
  
    0.807
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.804
APW66273.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.796
APW64675.1
Dihydroneopterin aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.776
APW66414.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.771
APW66621.1
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.768
APW64999.1
Outer membrane protein assembly factor BamD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.767
APW64807.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.764
APW66081.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.764
Your Current Organism:
Arcobacter sp. LPB0137
NCBI taxonomy Id: 1850254
Other names: A. sp. LPB0137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.