STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ69920.1Hypothetical protein. (958 aa)    
Predicted Functional Partners:
AQQ70434.1
Pectate lyase superfamily protein.
 
     0.766
AQQ71918.1
Polysaccharide export protein Wza.
  
    0.715
AQQ69821.1
Hypothetical protein.
  
     0.702
AQQ70286.1
Hypothetical protein.
  
     0.687
AQQ71501.1
Putative acetyltransferase.
  
     0.646
AQQ71749.1
Hypothetical protein.
  
     0.642
AQQ70433.1
Thermophilic serine proteinase precursor; Belongs to the peptidase S8 family.
  
     0.641
AQQ70535.1
Putative transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.639
AQQ71915.1
Tetratricopeptide repeat protein.
  
     0.639
AQQ72131.1
Fibronectin type III domain protein.
  
     0.631
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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