STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsbUPhosphoserine phosphatase RsbU. (419 aa)    
Predicted Functional Partners:
rsbW
Serine-protein kinase RsbW.
 
 
 0.951
AQQ70791.1
Putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.844
mlaE
Putative phospholipid ABC transporter permease protein MlaE.
  
 
 0.793
pleD_2
Stalked cell differentiation-controlling protein.
 
 
 0.786
btrV
Putative anti-sigma factor antagonist BtrV; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.785
nreB_2
Oxygen sensor histidine kinase NreB.
  
 
 0.775
nreB_1
Oxygen sensor histidine kinase NreB.
  
 
 0.736
pleC
Non-motile and phage-resistance protein.
 
  
 0.684
cmk
Cytidylate kinase.
       0.665
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.659
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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