Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQQ70260.1 | prsA2 | SMSP2_00604 | SMSP2_00600 | Peptidyl-prolyl cis-trans isomerase cyp18; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Foldase protein PrsA 2 precursor. | 0.547 |
guaB | prsA2 | SMSP2_00599 | SMSP2_00600 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Foldase protein PrsA 2 precursor. | 0.666 |
nifU | prsA2 | SMSP2_02732 | SMSP2_00600 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Foldase protein PrsA 2 precursor. | 0.518 |
prsA2 | AQQ70260.1 | SMSP2_00600 | SMSP2_00604 | Foldase protein PrsA 2 precursor. | Peptidyl-prolyl cis-trans isomerase cyp18; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.547 |
prsA2 | guaB | SMSP2_00600 | SMSP2_00599 | Foldase protein PrsA 2 precursor. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.666 |
prsA2 | nifU | SMSP2_00600 | SMSP2_02732 | Foldase protein PrsA 2 precursor. | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | 0.518 |
prsA2 | ybgC | SMSP2_00600 | SMSP2_00601 | Foldase protein PrsA 2 precursor. | Acyl-CoA thioester hydrolase YbgC. | 0.520 |
ybgC | prsA2 | SMSP2_00601 | SMSP2_00600 | Acyl-CoA thioester hydrolase YbgC. | Foldase protein PrsA 2 precursor. | 0.520 |