STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ70486.1Hypothetical protein. (270 aa)    
Predicted Functional Partners:
AQQ69821.1
Hypothetical protein.
  
     0.671
AQQ70951.1
Hypothetical protein.
  
     0.651
AQQ69920.1
Hypothetical protein.
  
     0.588
araR_3
Arabinose metabolism transcriptional repressor.
       0.584
AQQ71008.1
Hypothetical protein.
  
     0.576
AQQ70485.1
Putative major pilin subunit.
 
     0.573
AQQ71586.1
Hypothetical protein.
  
     0.551
AQQ71749.1
Hypothetical protein.
  
     0.531
AQQ70434.1
Pectate lyase superfamily protein.
  
 
 0.530
AQQ72486.1
Hypothetical protein.
  
     0.519
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.