STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycjS_4Putative oxidoreductase YcjS. (345 aa)    
Predicted Functional Partners:
wbpA
UDP-N-acetyl-D-glucosamine 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.925
wbpB
UDP-N-acetyl-2-amino-2-deoxy-D-glucuronate oxidase.
  
  
  0.921
fdtB_1
dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
    0.787
iolG_2
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase.
  
     0.750
nagA_1
Alpha-N-acetylgalactosaminidase.
  
     0.743
AQQ70547.1
Putative metal-dependent hydrolase of the TIM-barrel fold protein.
  
    0.723
wbpD
UDP-2-acetamido-3-amino-2, 3-dideoxy-D-glucuronate N-acetyltransferase.
 
    0.674
AQQ70551.1
Beta-galactosidase.
  
    0.662
sglT_12
Na(+)/glucose symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.660
AQQ70550.1
Hypothetical protein.
       0.658
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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