STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araR_4Arabinose metabolism transcriptional repressor. (391 aa)    
Predicted Functional Partners:
araR_5
Arabinose metabolism transcriptional repressor.
  
 
   0.783
galS_1
Mgl repressor and galactose ultrainduction factor.
  
     0.774
degA_1
Degradation activator.
  
     0.774
degA_2
Degradation activator.
  
     0.774
ccpA_3
Glucose-resistance amylase regulator.
  
     0.774
galS_2
Mgl repressor and galactose ultrainduction factor.
  
     0.774
cytR_1
HTH-type transcriptional repressor CytR.
  
     0.774
cytR_2
HTH-type transcriptional repressor CytR.
  
     0.774
cytR_3
HTH-type transcriptional repressor CytR.
  
     0.774
ccpA_4
Glucose-resistance amylase regulator.
  
     0.774
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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