STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ70651.1Putative lipoprotein. (201 aa)    
Predicted Functional Partners:
AQQ70653.1
Hypothetical protein.
 
  
 0.904
AQQ70650.1
Curli production assembly/transport component CsgG.
  
  
 0.794
AQQ70652.1
Putative periplasmic lipoprotein.
  
  
 0.705
AQQ72078.1
Transposase, IS30 family.
  
     0.498
nrfH
Cytochrome c-type protein NrfH.
  
     0.489
AQQ70957.1
Oxidoreductase family protein, NAD-binding Rossmann fold.
  
     0.484
nrfA
Cytochrome c-552 precursor.
  
     0.437
AQQ72242.1
Hypothetical protein.
  
     0.434
yvoA
HTH-type transcriptional repressor YvoA.
  
     0.410
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.