STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ70758.1Hypothetical protein. (107 aa)    
Predicted Functional Partners:
hsdM
Type I restriction enzyme EcoKI M protein.
 
 
 0.919
AQQ71856.1
Putative type I restriction enzymeP M protein.
 
 
 0.646
hsdR_1
Type-1 restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.608
AQQ71165.1
Putative type I restriction enzymeP M protein.
  
 
 0.545
AQQ71723.1
Putative type I restriction enzymeP M protein.
  
 
 0.545
AQQ71900.1
Type I restriction-modification system methyltransferase subunit.
  
 
 0.545
hsdR_3
Type-1 restriction enzyme R protein.
 
 
 0.530
hsdR_2
Type-1 restriction enzyme R protein.
  
  
 0.510
atpF
F-type ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
 
 
 0.413
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.