Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroE | pabA | SMSP2_02774 | SMSP2_01137 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Para-aminobenzoate synthase glutamine amidotransferase component II. | 0.608 |
| aroE | pabB | SMSP2_02774 | SMSP2_01231 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Para-aminobenzoate synthase component 1. | 0.650 |
| aroE | pheA | SMSP2_02774 | SMSP2_01125 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | P-protein. | 0.767 |
| aroE | trpA | SMSP2_02774 | SMSP2_01132 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.468 |
| aroE | trpB_1 | SMSP2_02774 | SMSP2_01133 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.416 |
| aroE | trpC | SMSP2_02774 | SMSP2_01135 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.561 |
| aroE | trpD | SMSP2_02774 | SMSP2_01136 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.454 |
| aroE | trpE | SMSP2_02774 | SMSP2_01138 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Anthranilate synthase component 1. | 0.498 |
| aroE | trpF | SMSP2_02774 | SMSP2_01134 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. | 0.457 |
| pabA | aroE | SMSP2_01137 | SMSP2_02774 | Para-aminobenzoate synthase glutamine amidotransferase component II. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.608 |
| pabA | pabB | SMSP2_01137 | SMSP2_01231 | Para-aminobenzoate synthase glutamine amidotransferase component II. | Para-aminobenzoate synthase component 1. | 0.999 |
| pabA | pheA | SMSP2_01137 | SMSP2_01125 | Para-aminobenzoate synthase glutamine amidotransferase component II. | P-protein. | 0.905 |
| pabA | trpA | SMSP2_01137 | SMSP2_01132 | Para-aminobenzoate synthase glutamine amidotransferase component II. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.929 |
| pabA | trpB_1 | SMSP2_01137 | SMSP2_01133 | Para-aminobenzoate synthase glutamine amidotransferase component II. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.869 |
| pabA | trpC | SMSP2_01137 | SMSP2_01135 | Para-aminobenzoate synthase glutamine amidotransferase component II. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.994 |
| pabA | trpD | SMSP2_01137 | SMSP2_01136 | Para-aminobenzoate synthase glutamine amidotransferase component II. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.996 |
| pabA | trpE | SMSP2_01137 | SMSP2_01138 | Para-aminobenzoate synthase glutamine amidotransferase component II. | Anthranilate synthase component 1. | 0.999 |
| pabA | trpF | SMSP2_01137 | SMSP2_01134 | Para-aminobenzoate synthase glutamine amidotransferase component II. | N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. | 0.982 |
| pabB | aroE | SMSP2_01231 | SMSP2_02774 | Para-aminobenzoate synthase component 1. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.650 |
| pabB | pabA | SMSP2_01231 | SMSP2_01137 | Para-aminobenzoate synthase component 1. | Para-aminobenzoate synthase glutamine amidotransferase component II. | 0.999 |
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