STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ70855.12-oxoglutarate-acceptor oxidoreductase subunit OorD. (87 aa)    
Predicted Functional Partners:
korB
2-oxoglutarate oxidoreductase subunit KorB.
 
  
 0.994
korA
2-oxoglutarate oxidoreductase subunit KorA.
 
  
  0.993
acoA_2
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha.
   
 
  0.902
ilvE_1
Branched-chain-amino-acid aminotransferase.
     
  0.900
ilvE_2
Branched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
     
  0.900
hndD_4
NADP-reducing hydrogenase subunit HndC.
   
 
 0.784
AQQ70856.1
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase.
       0.476
AQQ71664.1
Putative conserved protein, contains double-stranded beta-helix domain.
  
     0.416
afsK
Serine/threonine-protein kinase AfsK.
  
    0.406
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.