STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ70857.1Oligosaccharide amylase. (944 aa)    
Predicted Functional Partners:
AQQ72496.1
Hypothetical protein.
  
     0.669
AQQ71585.1
Hypothetical protein.
  
     0.660
AQQ71843.1
Hypothetical protein.
  
     0.660
AQQ70075.1
Hypothetical protein.
  
     0.647
AQQ71539.1
Hypothetical protein.
  
     0.613
AQQ71547.1
Hypothetical protein.
  
     0.605
AQQ70419.1
Hypothetical protein.
  
     0.599
lacZ_5
Beta-galactosidase.
 
     0.590
AQQ70858.1
Hypothetical protein.
       0.522
yvdM_1
Beta-phosphoglucomutase.
 
     0.496
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.