STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ70917.1GrpE. (221 aa)    
Predicted Functional Partners:
dnaK_1
Heat shock protein 70.
       0.773
AQQ70915.1
Von Willebrand factor type A domain protein.
       0.594
AQQ70914.1
Hypothetical protein.
       0.590
AQQ70912.1
Hypothetical protein.
       0.574
AQQ70913.1
Hypothetical protein.
       0.574
AQQ70918.1
Hypothetical protein.
       0.516
xerD_2
Tyrosine recombinase XerD; Belongs to the 'phage' integrase family.
       0.421
AQQ70919.1
Hypothetical protein.
       0.401
AQQ70920.1
Hypothetical protein.
       0.401
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.