STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ71028.1Hypothetical protein. (966 aa)    
Predicted Functional Partners:
sglT_17
Na(+)/glucose symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      0.823
AQQ71027.1
Alpha-L-fucosidase.
 
     0.815
xynD
Arabinoxylan arabinofuranohydrolase precursor.
 
 
   0.722
atsA_20
Arylsulfatase.
       0.686
AQQ70363.1
Putative dienelactone hydrolase.
 
     0.604
axe7A_1
Acetyl esterase Axe7A precursor.
 
     0.567
AQQ71155.1
Hypothetical protein.
  
     0.559
AQQ69932.1
Putative neuraminidase (sialidase).
  
     0.554
AQQ70394.1
GDSL-like Lipase/Acylhydrolase.
  
     0.531
AQQ70971.1
Hypothetical protein.
  
     0.520
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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