STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atsA_21Arylsulfatase. (524 aa)    
Predicted Functional Partners:
AQQ71114.1
Putative neuraminidase (sialidase).
   
   0.778
panF
Pantothenate permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.773
AQQ71115.1
Hypothetical protein.
       0.773
AQQ71108.1
Putative bile acid beta-glucosidase.
    
  0.628
AQQ71109.1
Putative bile acid beta-glucosidase.
    
  0.628
AQQ71110.1
Methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
       0.618
AQQ71111.1
Hypothetical protein.
       0.618
AQQ71107.1
Methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
       0.617
AQQ71106.1
Hypothetical protein.
       0.546
AQQ71116.1
Putative major pilin subunit.
       0.481
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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