STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atsA_24Arylsulfatase. (458 aa)    
Predicted Functional Partners:
AQQ71144.1
Hypothetical protein.
       0.773
atsA_31
Arylsulfatase precursor.
  
     0.753
AQQ71145.1
Hypothetical protein.
       0.678
AQQ71141.1
Methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
       0.668
AQQ71142.1
Beta-1,4-mannooligosaccharide phosphorylase.
       0.668
atsA_23
Arylsulfatase.
 
    
0.623
AQQ71139.1
Translocation protein TolB.
       0.585
AQQ71140.1
Hypothetical protein.
       0.585
betC_8
Choline-sulfatase.
 
    
0.581
dapA_4
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
       0.537
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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