STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macB_2Macrolide export ATP-binding/permease protein MacB. (229 aa)    
Predicted Functional Partners:
macB_1
Macrolide export ATP-binding/permease protein MacB.
 
 0.997
macB_3
Macrolide export ATP-binding/permease protein MacB.
 
 0.924
AQQ71208.1
Putative efflux pump membrane fusion protein.
 
 
 0.895
AQQ71209.1
Type I secretion outer membrane protein, TolC family.
 
 
 
 0.749
cusB
Cation efflux system protein CusB precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.590
pstB3
Phosphate import ATP-binding protein PstB 3; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
  
0.517
AQQ69763.1
FtsX-like permease family protein.
  
 
 0.479
AQQ69916.1
Hypothetical protein.
  
 
 0.479
AQQ70281.1
Outer membrane-specific lipoprotein transporter subunit LolE.
  
 
 0.479
lolE
Lipoprotein-releasing system transmembrane protein LolE.
  
 
 0.479
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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