STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ71368.1Hypothetical protein. (898 aa)    
Predicted Functional Partners:
AQQ71007.1
Hypothetical protein.
  
     0.762
AQQ69766.1
Hypothetical protein.
  
     0.705
AQQ69765.1
Outer membrane biogenesis protein BamB.
  
     0.675
AQQ69769.1
Outer membrane biogenesis protein BamB.
  
     0.610
AQQ70557.1
O-GlcNAcase precursor.
  
     0.514
bgaA
Beta-galactosidase BgaA.
  
     0.497
AQQ71369.1
Nitrous oxide reductase family maturation protein NosD.
       0.484
yccM_1
Putative electron transport protein YccM.
  
     0.476
betC_2
Choline-sulfatase.
  
     0.471
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.