STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ71491.1Maltose-binding periplasmic protein/domain. (552 aa)    
Predicted Functional Partners:
sugC
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
 0.976
malF
Maltose transport system permease protein MalF.
 
 
 0.976
sugB
Trehalose transport system permease protein SugB.
 
 
 0.974
bglA_3
Beta-glucosidase A.
  
  
 0.785
AQQ71490.1
Tol-pal system protein YbgF.
     
 0.774
AQQ71488.1
Hypothetical protein.
       0.718
exo-2
Beta-hexosaminidase.
       0.597
AQQ71494.1
Neuraminidase (sialidase).
       0.577
AQQ71486.1
Neuraminidase (sialidase).
       0.555
melA
Alpha-galactosidase.
 
    0.537
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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