STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ71501.1Putative acetyltransferase. (199 aa)    
Predicted Functional Partners:
pglA
N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase.
     
 0.776
AQQ70434.1
Pectate lyase superfamily protein.
  
     0.758
AQQ71503.1
UDP-glucose 4-epimerase.
  
  
 0.749
pimB_2
GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase.
     
 0.747
AQQ71505.1
Putative O-glycosylation ligase, exosortase A-associated.
       0.741
AQQ71915.1
Tetratricopeptide repeat protein.
 
    0.713
AQQ70433.1
Thermophilic serine proteinase precursor; Belongs to the peptidase S8 family.
  
 
   0.685
pglI
GalNAc(5)-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase.
     
 0.662
AQQ71918.1
Polysaccharide export protein Wza.
  
    0.662
AQQ69920.1
Hypothetical protein.
  
     0.646
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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