Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQQ71535.1 | AQQ71537.1 | SMSP2_01909 | SMSP2_01911 | Hypothetical protein. | Hypothetical protein. | 0.458 |
| AQQ71535.1 | tadA | SMSP2_01909 | SMSP2_01910 | Hypothetical protein. | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.741 |
| AQQ71537.1 | AQQ71535.1 | SMSP2_01911 | SMSP2_01909 | Hypothetical protein. | Hypothetical protein. | 0.458 |
| AQQ71537.1 | tadA | SMSP2_01911 | SMSP2_01910 | Hypothetical protein. | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.482 |
| AQQ71890.1 | birA | SMSP2_02269 | SMSP2_00090 | UGMP family protein. | Bifunctional protein BirA. | 0.930 |
| AQQ71890.1 | tadA | SMSP2_02269 | SMSP2_01910 | UGMP family protein. | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.453 |
| AQQ71890.1 | tilS | SMSP2_02269 | SMSP2_02610 | UGMP family protein. | tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.486 |
| AQQ71890.1 | truA | SMSP2_02269 | SMSP2_02600 | UGMP family protein. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.439 |
| birA | AQQ71890.1 | SMSP2_00090 | SMSP2_02269 | Bifunctional protein BirA. | UGMP family protein. | 0.930 |
| birA | tadA | SMSP2_00090 | SMSP2_01910 | Bifunctional protein BirA. | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.751 |
| birA | xthA | SMSP2_00090 | SMSP2_00651 | Bifunctional protein BirA. | Exodeoxyribonuclease III. | 0.723 |
| gmk | tadA | SMSP2_00494 | SMSP2_01910 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.423 |
| hisE | tadA | SMSP2_00615 | SMSP2_01910 | Phosphoribosyl-ATP pyrophosphatase. | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.587 |
| tadA | AQQ71535.1 | SMSP2_01910 | SMSP2_01909 | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Hypothetical protein. | 0.741 |
| tadA | AQQ71537.1 | SMSP2_01910 | SMSP2_01911 | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Hypothetical protein. | 0.482 |
| tadA | AQQ71890.1 | SMSP2_01910 | SMSP2_02269 | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | UGMP family protein. | 0.453 |
| tadA | birA | SMSP2_01910 | SMSP2_00090 | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Bifunctional protein BirA. | 0.751 |
| tadA | gmk | SMSP2_01910 | SMSP2_00494 | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.423 |
| tadA | hisE | SMSP2_01910 | SMSP2_00615 | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Phosphoribosyl-ATP pyrophosphatase. | 0.587 |
| tadA | tilS | SMSP2_01910 | SMSP2_02610 | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.883 |
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