STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ71862.1Hypothetical protein. (709 aa)    
Predicted Functional Partners:
AQQ70238.1
Hypothetical protein.
  
     0.773
AQQ69766.1
Hypothetical protein.
  
     0.731
AQQ72204.1
Nitrous oxide reductase family maturation protein NosD.
  
     0.723
speB_1
Streptopain precursor.
  
     0.720
AQQ69765.1
Outer membrane biogenesis protein BamB.
  
     0.613
AQQ70889.1
Hypothetical protein.
  
     0.609
AQQ69769.1
Outer membrane biogenesis protein BamB.
  
     0.595
AQQ70500.1
Putative transposase OrfB.
  
     0.585
AQQ70970.1
Putative transposase OrfB.
  
     0.583
AQQ71012.1
Putative transposase OrfB.
  
     0.575
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.