Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQQ72322.1 | axeA1_3 | SMSP2_02705 | SMSP2_02708 | Hypothetical protein. | Acetylxylan esterase precursor. | 0.457 |
AQQ72322.1 | corC_2 | SMSP2_02705 | SMSP2_02706 | Hypothetical protein. | Magnesium and cobalt efflux protein CorC. | 0.639 |
AQQ72322.1 | gspE_2 | SMSP2_02705 | SMSP2_02704 | Hypothetical protein. | Type II traffic warden ATPase. | 0.758 |
AQQ72322.1 | pilT_5 | SMSP2_02705 | SMSP2_02703 | Hypothetical protein. | Twitching mobility protein. | 0.482 |
AQQ72322.1 | tlyC | SMSP2_02705 | SMSP2_02707 | Hypothetical protein. | Hemolysin C. | 0.639 |
axeA1_3 | AQQ72322.1 | SMSP2_02708 | SMSP2_02705 | Acetylxylan esterase precursor. | Hypothetical protein. | 0.457 |
axeA1_3 | corC_2 | SMSP2_02708 | SMSP2_02706 | Acetylxylan esterase precursor. | Magnesium and cobalt efflux protein CorC. | 0.542 |
axeA1_3 | gspE_2 | SMSP2_02708 | SMSP2_02704 | Acetylxylan esterase precursor. | Type II traffic warden ATPase. | 0.443 |
axeA1_3 | sugE | SMSP2_02708 | SMSP2_02709 | Acetylxylan esterase precursor. | Quaternary ammonium compound-resistance protein SugE. | 0.584 |
axeA1_3 | tlyC | SMSP2_02708 | SMSP2_02707 | Acetylxylan esterase precursor. | Hemolysin C. | 0.542 |
corC_2 | AQQ72322.1 | SMSP2_02706 | SMSP2_02705 | Magnesium and cobalt efflux protein CorC. | Hypothetical protein. | 0.639 |
corC_2 | axeA1_3 | SMSP2_02706 | SMSP2_02708 | Magnesium and cobalt efflux protein CorC. | Acetylxylan esterase precursor. | 0.542 |
corC_2 | gspE_2 | SMSP2_02706 | SMSP2_02704 | Magnesium and cobalt efflux protein CorC. | Type II traffic warden ATPase. | 0.618 |
corC_2 | pilT_5 | SMSP2_02706 | SMSP2_02703 | Magnesium and cobalt efflux protein CorC. | Twitching mobility protein. | 0.402 |
corC_2 | sugE | SMSP2_02706 | SMSP2_02709 | Magnesium and cobalt efflux protein CorC. | Quaternary ammonium compound-resistance protein SugE. | 0.426 |
corC_2 | tlyC | SMSP2_02706 | SMSP2_02707 | Magnesium and cobalt efflux protein CorC. | Hemolysin C. | 0.851 |
gspE_2 | AQQ72322.1 | SMSP2_02704 | SMSP2_02705 | Type II traffic warden ATPase. | Hypothetical protein. | 0.758 |
gspE_2 | axeA1_3 | SMSP2_02704 | SMSP2_02708 | Type II traffic warden ATPase. | Acetylxylan esterase precursor. | 0.443 |
gspE_2 | corC_2 | SMSP2_02704 | SMSP2_02706 | Type II traffic warden ATPase. | Magnesium and cobalt efflux protein CorC. | 0.618 |
gspE_2 | pilT_5 | SMSP2_02704 | SMSP2_02703 | Type II traffic warden ATPase. | Twitching mobility protein. | 0.770 |
page 1 of 2