STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001659985_01967Unannotated protein. (276 aa)    
Predicted Functional Partners:
GCA_001659985_01491
Unannotated protein.
    
  0.747
GCA_001659985_01135
Unannotated protein.
    
   0.628
GCA_001659985_03584
Unannotated protein.
    
  0.474
GCA_001659985_03094
Unannotated protein.
  
  
 
0.450
GCA_001659985_01114
Unannotated protein.
  
  
0.420
GCA_001659985_00206
Unannotated protein.
  
  
0.415
GCA_001659985_00654
Unannotated protein.
    
  0.401
GCA_001659985_03191
Unannotated protein.
    
  0.401
Your Current Organism:
Oceanobacillus sp. Castelsardo
NCBI taxonomy Id: 1851204
Other names: O. sp. Castelsardo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.