STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104585_01388Unannotated protein. (338 aa)    
Predicted Functional Partners:
GCA_900104585_00201
Unannotated protein.
  
 0.891
GCA_900104585_01387
Unannotated protein.
 
     0.865
GCA_900104585_01386
Unannotated protein.
 
  
 0.863
GCA_900104585_01389
Unannotated protein.
 
  
 0.775
GCA_900104585_00630
Unannotated protein.
  
 
 0.742
GCA_900104585_00566
Unannotated protein.
  
 0.728
GCA_900104585_00632
Unannotated protein.
  
  
 0.708
GCA_900104585_00634
Unannotated protein.
  
 
 0.707
GCA_900104585_00635
Unannotated protein.
  
  
 0.536
GCA_900104585_01390
Unannotated protein.
  
  
 0.512
Your Current Organism:
Bacteroides ihuae
NCBI taxonomy Id: 1852362
Other names: B. ihuae, Bacteroides sp. Marseille-P2824, CCUG 70550, CSUR P2824, strain Marseille-P2824
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.