STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900120005_00477Unannotated protein. (240 aa)    
Predicted Functional Partners:
GCA_900120005_01047
Unannotated protein.
 
  
 0.866
GCA_900120005_00701
Unannotated protein.
  
 
 0.854
GCA_900120005_00474
Unannotated protein.
 
  
 0.853
GCA_900120005_00302
Unannotated protein.
    
 0.844
GCA_900120005_00412
Unannotated protein.
    
 0.844
GCA_900120005_00424
Unannotated protein.
    
 0.844
GCA_900120005_00445
Unannotated protein.
    
 0.844
GCA_900120005_00494
Unannotated protein.
    
 0.844
GCA_900120005_01118
Unannotated protein.
    
 0.844
GCA_900120005_01418
Unannotated protein.
    
 0.844
Your Current Organism:
Holdemania sp. MarseilleP2844
NCBI taxonomy Id: 1852366
Other names: H. sp. Marseille-P2844, Holdemania sp. Marseille-P2844
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.