STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900106785_00842Unannotated protein. (136 aa)    
Predicted Functional Partners:
GCA_900106785_00843
Unannotated protein.
     0.994
GCA_900106785_00379
Unannotated protein.
 
 0.869
GCA_900106785_00378
Unannotated protein.
  
 0.838
GCA_900106785_01159
Unannotated protein.
  
 0.833
GCA_900106785_02362
Unannotated protein.
   
 0.830
GCA_900106785_02520
Unannotated protein.
  
 0.741
GCA_900106785_02778
Unannotated protein.
 
  
 0.661
GCA_900106785_00986
Unannotated protein.
 
 
 0.584
GCA_900106785_00205
Unannotated protein.
   
 
 0.578
GCA_900106785_00981
Unannotated protein.
    
 
 0.575
Your Current Organism:
Prevotellamassilia timonensis
NCBI taxonomy Id: 1852370
Other names: CSUR P2831, P. timonensis, Prevotellaceae bacterium Marseille-P2831, strain Marseille-P2831
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.