STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900095825_00038Unannotated protein. (487 aa)    
Predicted Functional Partners:
GCA_900095825_00037
Unannotated protein.
    
  0.778
GCA_900095825_00036
Unannotated protein.
    
  0.748
GCA_900095825_01705
Unannotated protein.
   
 
  0.725
GCA_900095825_01503
Unannotated protein.
     
 0.688
GCA_900095825_02147
Unannotated protein.
  
 
 0.610
GCA_900095825_02296
Unannotated protein.
   
 
 0.554
GCA_900095825_00035
Unannotated protein.
       0.437
GCA_900095825_00447
Unannotated protein.
   
 
 0.432
GCA_900095825_00904
Unannotated protein.
     
 0.427
GCA_900095825_01778
Unannotated protein.
     
 0.427
Your Current Organism:
Acidaminococcus massiliensis
NCBI taxonomy Id: 1852375
Other names: A. massiliensis, Acidaminococcus sp. Marseille-P2828, CSUR P2828, strain Marseille-P2828
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.