STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900095825_00460Unannotated protein. (125 aa)    
Predicted Functional Partners:
GCA_900095825_00461
Unannotated protein.
 
    0.971
GCA_900095825_00459
Unannotated protein.
 
     0.851
GCA_900095825_00458
Unannotated protein.
 
     0.812
GCA_900095825_00455
Unannotated protein.
 
     0.811
GCA_900095825_00454
Unannotated protein.
 
     0.769
GCA_900095825_00453
Unannotated protein.
 
     0.759
GCA_900095825_00456
Unannotated protein.
 
     0.750
GCA_900095825_00457
Unannotated protein.
 
     0.745
GCA_900095825_00462
Unannotated protein.
       0.645
GCA_900095825_01680
Unannotated protein.
  
 
  0.614
Your Current Organism:
Acidaminococcus massiliensis
NCBI taxonomy Id: 1852375
Other names: A. massiliensis, Acidaminococcus sp. Marseille-P2828, CSUR P2828, strain Marseille-P2828
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.