STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900095825_01016Unannotated protein. (310 aa)    
Predicted Functional Partners:
GCA_900095825_01176
Unannotated protein.
  
     0.773
GCA_900095825_00684
Unannotated protein.
  
     0.772
GCA_900095825_01838
Unannotated protein.
  
     0.766
GCA_900095825_01980
Unannotated protein.
  
     0.713
GCA_900095825_00943
Unannotated protein.
  
     0.696
GCA_900095825_01017
Unannotated protein.
       0.535
GCA_900095825_01018
Unannotated protein.
       0.521
Your Current Organism:
Acidaminococcus massiliensis
NCBI taxonomy Id: 1852375
Other names: A. massiliensis, Acidaminococcus sp. Marseille-P2828, CSUR P2828, strain Marseille-P2828
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.