STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900095825_01117Unannotated protein. (173 aa)    
Predicted Functional Partners:
GCA_900095825_02066
Unannotated protein.
    
  0.827
GCA_900095825_01503
Unannotated protein.
    
  0.788
GCA_900095825_01849
Unannotated protein.
    
  0.771
GCA_900095825_02147
Unannotated protein.
    
  0.770
GCA_900095825_00842
Unannotated protein.
  
 
 0.748
GCA_900095825_02200
Unannotated protein.
  
 
  0.727
GCA_900095825_01779
Unannotated protein.
    
 0.684
GCA_900095825_01116
Unannotated protein.
 
 
 
0.664
GCA_900095825_01160
Unannotated protein.
  
 
  0.609
GCA_900095825_01410
Unannotated protein.
  
 
  0.609
Your Current Organism:
Acidaminococcus massiliensis
NCBI taxonomy Id: 1852375
Other names: A. massiliensis, Acidaminococcus sp. Marseille-P2828, CSUR P2828, strain Marseille-P2828
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.