STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900095825_02088Unannotated protein. (230 aa)    
Predicted Functional Partners:
GCA_900095825_02087
Unannotated protein.
 
  
 0.971
GCA_900095825_02089
Unannotated protein.
 
    0.837
GCA_900095825_02090
Unannotated protein.
       0.772
GCA_900095825_02091
Unannotated protein.
       0.772
GCA_900095825_02092
Unannotated protein.
  
    0.762
GCA_900095825_02093
Unannotated protein.
       0.757
GCA_900095825_02365
Unannotated protein.
 
     0.646
GCA_900095825_02086
Unannotated protein.
     
 0.532
GCA_900095825_02084
Unannotated protein.
       0.471
GCA_900095825_02085
Unannotated protein.
       0.471
Your Current Organism:
Acidaminococcus massiliensis
NCBI taxonomy Id: 1852375
Other names: A. massiliensis, Acidaminococcus sp. Marseille-P2828, CSUR P2828, strain Marseille-P2828
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.