STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900095875_00460Unannotated protein. (495 aa)    
Predicted Functional Partners:
GCA_900095875_00458
Unannotated protein.
     0.818
GCA_900095875_00462
Unannotated protein.
 
     0.756
GCA_900095875_00177
Unannotated protein.
 
     0.643
GCA_900095875_00461
Unannotated protein.
       0.636
GCA_900095875_00224
Unannotated protein.
  
     0.564
GCA_900095875_00863
Unannotated protein.
 
   
 0.547
GCA_900095875_00503
Unannotated protein.
 
  
 0.506
GCA_900095875_00463
Unannotated protein.
       0.503
GCA_900095875_00226
Unannotated protein.
 
  
 0.501
GCA_900095875_00459
Unannotated protein.
 
    
0.500
Your Current Organism:
Caecibacter massiliensis
NCBI taxonomy Id: 1852378
Other names: C. massiliensis, CSUR P2974, Veillonellaceae bacterium Marseille-P2974, strain Marseille-P2974
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.