STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900095875_01117Unannotated protein. (141 aa)    
Predicted Functional Partners:
GCA_900095875_00766
Unannotated protein.
    
 0.772
GCA_900095875_00767
Unannotated protein.
    
 0.756
GCA_900095875_00732
Unannotated protein.
    
 0.693
GCA_900095875_00295
Unannotated protein.
    
 0.692
GCA_900095875_01118
Unannotated protein.
  
 
 0.655
GCA_900095875_00064
Unannotated protein.
   
 
 0.568
GCA_900095875_02105
Unannotated protein.
   
 
 0.502
GCA_900095875_02227
Unannotated protein.
   
 
 0.502
GCA_900095875_00406
Unannotated protein.
    
  0.474
GCA_900095875_01775
Unannotated protein.
    
  0.474
Your Current Organism:
Caecibacter massiliensis
NCBI taxonomy Id: 1852378
Other names: C. massiliensis, CSUR P2974, Veillonellaceae bacterium Marseille-P2974, strain Marseille-P2974
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.