STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900095875_02177Unannotated protein. (275 aa)    
Predicted Functional Partners:
GCA_900095875_02178
Unannotated protein.
 0.999
GCA_900095875_02179
Unannotated protein.
 0.994
GCA_900095875_01476
Unannotated protein.
  
    0.558
GCA_900095875_01727
Unannotated protein.
   
 
  0.500
GCA_900095875_01765
Unannotated protein.
   
 
  0.490
GCA_900095875_02453
Unannotated protein.
   
 
  0.490
GCA_900095875_00553
Unannotated protein.
   
 
  0.488
GCA_900095875_01432
Unannotated protein.
   
 
  0.488
GCA_900095875_02347
Unannotated protein.
 
 
 
  0.488
GCA_900095875_00448
Unannotated protein.
   
 
  0.483
Your Current Organism:
Caecibacter massiliensis
NCBI taxonomy Id: 1852378
Other names: C. massiliensis, CSUR P2974, Veillonellaceae bacterium Marseille-P2974, strain Marseille-P2974
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.