STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900095855_00480Unannotated protein. (476 aa)    
Predicted Functional Partners:
GCA_900095855_00479
Unannotated protein.
 
 
 0.981
GCA_900095855_00481
Unannotated protein.
 
    
0.811
GCA_900095855_01476
Unannotated protein.
  
 
 0.794
GCA_900095855_00482
Unannotated protein.
 
    
0.743
GCA_900095855_00478
Unannotated protein.
       0.686
GCA_900095855_00663
Unannotated protein.
   
   0.625
GCA_900095855_01413
Unannotated protein.
   
   0.625
GCA_900095855_00483
Unannotated protein.
       0.593
GCA_900095855_00899
Unannotated protein.
   
   0.492
GCA_900095855_00484
Unannotated protein.
       0.438
Your Current Organism:
Colibacter massiliensis
NCBI taxonomy Id: 1852379
Other names: C. massiliensis, CSUR P2911, DSM 103304, Veillonellaceae bacterium Marseille-P2911, strain Marseille-P2911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.