STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900095855_00939Unannotated protein. (325 aa)    
Predicted Functional Partners:
GCA_900095855_00940
Unannotated protein.
 
 0.999
GCA_900095855_00886
Unannotated protein.
 
 
 0.985
GCA_900095855_00941
Unannotated protein.
 
  
 0.977
GCA_900095855_00887
Unannotated protein.
 
     0.729
GCA_900095855_00145
Unannotated protein.
 
 
  0.574
GCA_900095855_01338
Unannotated protein.
    
  0.514
GCA_900095855_01029
Unannotated protein.
   
  
 0.512
GCA_900095855_00451
Unannotated protein.
  
 
  0.444
GCA_900095855_00938
Unannotated protein.
       0.437
GCA_900095855_00942
Unannotated protein.
       0.411
Your Current Organism:
Colibacter massiliensis
NCBI taxonomy Id: 1852379
Other names: C. massiliensis, CSUR P2911, DSM 103304, Veillonellaceae bacterium Marseille-P2911, strain Marseille-P2911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.