STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900095855_01385Unannotated protein. (319 aa)    
Predicted Functional Partners:
GCA_900095855_01384
Unannotated protein.
  
 0.955
GCA_900095855_00210
Unannotated protein.
  
 0.905
GCA_900095855_01390
Unannotated protein.
 
     0.879
GCA_900095855_01400
Unannotated protein.
 
     0.742
GCA_900095855_01389
Unannotated protein.
 
     0.740
GCA_900095855_01386
Unannotated protein.
       0.719
GCA_900095855_01387
Unannotated protein.
       0.719
GCA_900095855_00899
Unannotated protein.
     
 0.666
GCA_900095855_01388
Unannotated protein.
       0.643
GCA_900095855_01391
Unannotated protein.
       0.643
Your Current Organism:
Colibacter massiliensis
NCBI taxonomy Id: 1852379
Other names: C. massiliensis, CSUR P2911, DSM 103304, Veillonellaceae bacterium Marseille-P2911, strain Marseille-P2911
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.