STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900128485_01616Unannotated protein. (593 aa)    
Predicted Functional Partners:
GCA_900128485_01615
Unannotated protein.
 
     0.842
GCA_900128485_01614
Unannotated protein.
       0.791
GCA_900128485_01002
Unannotated protein.
    
 
 0.667
GCA_900128485_00704
Unannotated protein.
    
  0.513
GCA_900128485_01617
Unannotated protein.
     
 0.505
GCA_900128485_00219
Unannotated protein.
    
  0.468
GCA_900128485_01873
Unannotated protein.
  
     0.466
GCA_900128485_01618
Unannotated protein.
       0.462
GCA_900128485_00944
Unannotated protein.
 
     0.438
GCA_900128485_00531
Unannotated protein.
  
     0.433
Your Current Organism:
Duodenibacillus massiliensis
NCBI taxonomy Id: 1852381
Other names: CSUR P2968, D. massiliensis, Sutterellaceae bacterium Marseille-P2968, strain Marseille-P2968
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.