STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900128485_01872Unannotated protein. (226 aa)    
Predicted Functional Partners:
GCA_900128485_01873
Unannotated protein.
 0.993
GCA_900128485_01746
Unannotated protein.
 0.991
GCA_900128485_01085
Unannotated protein.
 
   
  0.941
GCA_900128485_01586
Unannotated protein.
 
  
0.941
GCA_900128485_00903
Unannotated protein.
   
 
 0.928
GCA_900128485_01766
Unannotated protein.
 
   
 0.895
GCA_900128485_01871
Unannotated protein.
   
   0.806
GCA_900128485_00137
Unannotated protein.
  
 0.729
GCA_900128485_01744
Unannotated protein.
 
 0.729
GCA_900128485_01890
Unannotated protein.
  
 0.729
Your Current Organism:
Duodenibacillus massiliensis
NCBI taxonomy Id: 1852381
Other names: CSUR P2968, D. massiliensis, Sutterellaceae bacterium Marseille-P2968, strain Marseille-P2968
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.