STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900128485_01938Unannotated protein. (539 aa)    
Predicted Functional Partners:
GCA_900128485_01939
Unannotated protein.
       0.642
GCA_900128485_02115
Unannotated protein.
  
 
  0.593
GCA_900128485_01388
Unannotated protein.
   
  0.548
GCA_900128485_00951
Unannotated protein.
    
  0.537
GCA_900128485_01015
Unannotated protein.
    
  0.517
GCA_900128485_01078
Unannotated protein.
    
  0.517
GCA_900128485_00973
Unannotated protein.
   
 
  0.506
GCA_900128485_01886
Unannotated protein.
    
  0.428
Your Current Organism:
Duodenibacillus massiliensis
NCBI taxonomy Id: 1852381
Other names: CSUR P2968, D. massiliensis, Sutterellaceae bacterium Marseille-P2968, strain Marseille-P2968
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.