STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104565_00055Unannotated protein. (142 aa)    
Predicted Functional Partners:
GCA_900104565_00054
Unannotated protein.
 
 
 0.893
GCA_900104565_01830
Unannotated protein.
 
  
 0.731
GCA_900104565_00572
Unannotated protein.
 
  
 0.661
GCA_900104565_00570
Unannotated protein.
 
 
 0.542
GCA_900104565_00571
Unannotated protein.
 
 
 0.537
GCA_900104565_00053
Unannotated protein.
       0.503
GCA_900104565_02391
Unannotated protein.
 
  
 0.503
GCA_900104565_00052
Unannotated protein.
       0.482
GCA_900104565_00343
Unannotated protein.
  
 
 0.480
GCA_900104565_01904
Unannotated protein.
 
  
 0.431
Your Current Organism:
Ruminococcaceae bacterium MarseilleP2935
NCBI taxonomy Id: 1852383
Other names: R. bacterium Marseille-P2935, Ruminococcaceae bacterium Marseille-P2935
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.