STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001657295_00777Unannotated protein. (506 aa)    
Predicted Functional Partners:
GCA_001657295_02753
Unannotated protein.
  
    0.838
GCA_001657295_00778
Unannotated protein.
       0.773
GCA_001657295_00417
Unannotated protein.
   
    0.723
GCA_001657295_01408
Unannotated protein.
  
    0.704
GCA_001657295_03063
Unannotated protein.
 
 
 0.666
GCA_001657295_00677
Unannotated protein.
  
 
 0.664
GCA_001657295_00396
Unannotated protein.
  
 
 0.649
GCA_001657295_00776
Unannotated protein.
       0.630
GCA_001657295_02947
Unannotated protein.
 
     0.601
GCA_001657295_00673
Unannotated protein.
    
 0.580
Your Current Organism:
Oceanicaulis sp. BBD199110
NCBI taxonomy Id: 1852617
Other names: O. sp. BBD 1991-10, Oceanicaulis sp. BBD 1991-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.