STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001657385_01282Unannotated protein. (305 aa)    
Predicted Functional Partners:
GCA_001657385_01283
Unannotated protein.
 
 
 0.969
GCA_001657385_01285
Unannotated protein.
 
  
 0.945
GCA_001657385_01284
Unannotated protein.
 
  
 0.908
GCA_001657385_01313
Unannotated protein.
  
 
 0.880
GCA_001657385_01289
Unannotated protein.
 
    0.869
GCA_001657385_01288
Unannotated protein.
 
    0.867
GCA_001657385_01286
Unannotated protein.
 
    0.862
GCA_001657385_01307
Unannotated protein.
  
    0.854
GCA_001657385_01287
Unannotated protein.
 
    0.844
GCA_001657385_01292
Unannotated protein.
 
     0.834
Your Current Organism:
Parvularcula sp. BBD199113
NCBI taxonomy Id: 1852618
Other names: P. sp. BBD 1991-13, Parvularcula sp. BBD 1991-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.