STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001657315_00099Unannotated protein. (799 aa)    
Predicted Functional Partners:
GCA_001657315_00100
Unannotated protein.
 
    
0.844
GCA_001657315_00101
Unannotated protein.
 
    
0.831
GCA_001657315_01957
Unannotated protein.
  
  
  0.753
GCA_001657315_01955
Unannotated protein.
  
  
  0.720
GCA_001657315_06850
Unannotated protein.
 
  
  0.579
GCA_001657315_04220
Unannotated protein.
  
  
  0.525
GCA_001657315_01712
Unannotated protein.
  
     0.442
GCA_001657315_00102
Unannotated protein.
  
    0.437
GCA_001657315_01694
Unannotated protein.
  
  
  0.432
GCA_001657315_05076
Unannotated protein.
  
  
  0.406
Your Current Organism:
Flammeovirgaceae bacterium BBD199112
NCBI taxonomy Id: 1852619
Other names: F. bacterium BBD 1991-12, Flammeovirgaceae bacterium BBD 1991-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.