STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001657315_06038Unannotated protein. (304 aa)    
Predicted Functional Partners:
GCA_001657315_06039
Unannotated protein.
 
     0.887
GCA_001657315_00143
Unannotated protein.
   
 
  0.849
GCA_001657315_06037
Unannotated protein.
    
 0.807
GCA_001657315_06040
Unannotated protein.
 
     0.714
GCA_001657315_06082
Unannotated protein.
  
     0.680
GCA_001657315_02425
Unannotated protein.
    
 0.662
GCA_001657315_05879
Unannotated protein.
  
  
  0.646
GCA_001657315_03322
Unannotated protein.
     
 0.644
GCA_001657315_04017
Unannotated protein.
  
  
  0.605
GCA_001657315_03889
Unannotated protein.
  
 
 0.600
Your Current Organism:
Flammeovirgaceae bacterium BBD199112
NCBI taxonomy Id: 1852619
Other names: F. bacterium BBD 1991-12, Flammeovirgaceae bacterium BBD 1991-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.