STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001676655_00199Unannotated protein. (776 aa)    
Predicted Functional Partners:
GCA_001676655_00200
Unannotated protein.
       0.775
GCA_001676655_01880
Unannotated protein.
   
  0.756
GCA_001676655_00492
Unannotated protein.
  
     0.739
GCA_001676655_00710
Unannotated protein.
  
     0.689
GCA_001676655_00800
Unannotated protein.
  
     0.668
GCA_001676655_00025
Unannotated protein.
  
     0.611
GCA_001676655_00414
Unannotated protein.
  
     0.600
GCA_001676655_00720
Unannotated protein.
  
     0.589
GCA_001676655_01128
Unannotated protein.
  
     0.586
GCA_001676655_00088
Unannotated protein.
  
     0.571
Your Current Organism:
Perlucidibaca aquatica
NCBI taxonomy Id: 1852776
Other names: JCM 31377, KCTC 52162, P. aquatica, Perlucidibaca aquatica Baek et al. 2017, Perlucidibaca sp. BK296, strain BK296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.