STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001676655_00321Unannotated protein. (207 aa)    
Predicted Functional Partners:
GCA_001676655_01899
Unannotated protein.
  
     0.635
GCA_001676655_01869
Unannotated protein.
  
     0.629
GCA_001676655_00127
Unannotated protein.
  
     0.584
GCA_001676655_00966
Unannotated protein.
  
     0.582
GCA_001676655_00094
Unannotated protein.
  
    0.563
GCA_001676655_00236
Unannotated protein.
  
     0.561
GCA_001676655_00110
Unannotated protein.
  
  
  0.545
GCA_001676655_01905
Unannotated protein.
  
    0.520
GCA_001676655_01320
Unannotated protein.
  
    0.505
GCA_001676655_01102
Unannotated protein.
  
     0.494
Your Current Organism:
Perlucidibaca aquatica
NCBI taxonomy Id: 1852776
Other names: JCM 31377, KCTC 52162, P. aquatica, Perlucidibaca aquatica Baek et al. 2017, Perlucidibaca sp. BK296, strain BK296
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.