STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001676655_01448Unannotated protein. (119 aa)    
Predicted Functional Partners:
GCA_001676655_00758
Unannotated protein.
 
 
 0.999
GCA_001676655_01447
Unannotated protein.
  
 
 0.999
GCA_001676655_00759
Unannotated protein.
 
 
 0.998
GCA_001676655_01446
Unannotated protein.
  
 0.998
GCA_001676655_01924
Unannotated protein.
  
 
 0.998
GCA_001676655_02280
Unannotated protein.
  
 
 0.998
GCA_001676655_02360
Unannotated protein.
  
 
 0.998
GCA_001676655_02361
Unannotated protein.
  
 
 0.998
GCA_001676655_00030
Unannotated protein.
 
 
 0.997
GCA_001676655_00140
Unannotated protein.
  
 
 0.997
Your Current Organism:
Perlucidibaca aquatica
NCBI taxonomy Id: 1852776
Other names: JCM 31377, KCTC 52162, P. aquatica, Perlucidibaca aquatica Baek et al. 2017, Perlucidibaca sp. BK296, strain BK296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.