STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001858025_05009Hypothetical protein. (170 aa)    
Predicted Functional Partners:
GCA_001858025_04992
Hypothetical protein.
  
     0.576
der_4
GTPase Der.
       0.522
GCA_001858025_04448
Hypothetical protein.
  
     0.475
GCA_001858025_01243
Hypothetical protein.
  
     0.466
GCA_001858025_01199
Hypothetical protein.
  
     0.449
GCA_001858025_02449
Hypothetical protein.
  
     0.449
GCA_001858025_04469
Hypothetical protein.
  
     0.412
GCA_001858025_04276
Hypothetical protein.
  
     0.407
GCA_001858025_02995
Hypothetical protein.
  
     0.403
GCA_001858025_03119
Hypothetical protein.
  
     0.401
Your Current Organism:
Trichormus sp. NMC1
NCBI taxonomy Id: 1853259
Other names: T. sp. NMC-1, Trichormus sp. NMC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.